BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F09SP1|AL426400
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1761 1576 0.0
>3x_Contig1761
Length = 23186
Score = 1576 bits (790), Expect = 0.0
Identities = 802/811 (98%)
Strand = Plus / Plus
Query: 1 gatcgccatgagattggttatgaagatgtcagckggttacgaactaagtcgtagagaaaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 17976 gatcgccatgagattggttatgaagatgtcagctggttacgaactaagtcgtagagaaaa 18035
Query: 61 gattcaattgavaagaactactcaagatatgattagactagtgccattcagtgcttttgt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18036 gattcaattgaaaagaactactcaagatatgattagactagtgccattcagtgcttttgt 18095
Query: 121 cattgtcccatttgctgaacttttgttgccaattgccttgaaacttttcccaaatctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18096 cattgtcccatttgctgaacttttgttgccaattgccttgaaacttttcccaaatctttt 18155
Query: 181 gccttccacttacgaatctaagamagataaacaaactaagcttgagagtcttagaaagac 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 18156 gccttccacttacgaatctaagaaagataaacaaactaagcttgagagtcttagaaagac 18215
Query: 241 tagatcagttatgtctganataatcaaggaaaacaaatcccatttcaagccaagtaacat 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 18216 tagatcagttatgtctgaaataatcaaggaaaacaaatcccatttcaagccaagtaacat 18275
Query: 301 tactgaggaacaaaagttggtctttaatagcttttacaagcacgttagagaaactggtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18276 tactgaggaacaaaagttggtctttaatagcttttacaagcacgttagagaaactggtga 18335
Query: 361 accagaatcacgtgaacmactaatccaagtagcacgtctatttacagacgatactgtgtt 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18336 accagaatcacgtgaacaactaatccaagtagcacgtctatttacagacgatactgtgtt 18395
Query: 421 ggataacttgaccagaccatatttagtcgccattgctaaatacattaacttgcmaccatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 18396 ggataacttgaccagaccatatttagtcgccattgctaaatacattaacttgcaaccatt 18455
Query: 481 tggtaccgatgtcatgttacgttaccgtatccgttacaagatgttagagttaaagacgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18456 tggtaccgatgtcatgttacgttaccgtatccgttacaagatgttagagttaaagacgga 18515
Query: 541 tgatttggctatctattacgaaggagttgaatcattagacgctattgamttgcgtacggc 600
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 18516 tgatttggctatctattacgaaggagttgaatcattagacgctattgaattgcgtacggc 18575
Query: 601 ttgtgcttctagaggtatcagamacttgaacgtggaagasagtgttctacgtgataactt 660
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 18576 ttgtgcttctagaggtatcagaaacttgaacgtggaagaaagtgttctacgtgataactt 18635
Query: 661 gaagatttggttaaacatgaggctgaaggataagattccatcaactttactagttatggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18636 gaagatttggttaaacatgaggctgaaggataagattccatcaactttactagttatggc 18695
Query: 721 taccgcatacacttacggtgatattggttctaagaagacgttgtatgacgccttatgtga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18696 taccgcatacacttacggtgatattggttctaagaagacgttgtatgacgccttatgtga 18755
Query: 781 cgtcttatctggtattccagacgagttgtac 811
|||||||||||||||||||||||||||||||
Sbjct: 18756 cgtcttatctggtattccagacgagttgtac 18786
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4886
Number of Sequences: 1807
Number of extensions: 4886
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)